J4_3JA1_013

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGUAAUGUC*GAUG*CUAG*CC

Length

20 nucleotides

Bulged bases

3JA1|1|SA|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|SA|G|115
3JA1|1|SA|A|116
3JA1|1|SA|G|117
3JA1|1|SA|U|118
3JA1|1|SA|A|119
3JA1|1|SA|A|120
3JA1|1|SA|U|121
3JA1|1|SA|G|122
3JA1|1|SA|U|123
3JA1|1|SA|C|124
*
3JA1|1|SA|G|237
3JA1|1|SA|A|238
3JA1|1|SA|U|239
3JA1|1|SA|G|240
*
3JA1|1|SA|C|286
3JA1|1|SA|U|287
3JA1|1|SA|A|288
3JA1|1|SA|G|289
*
3JA1|1|SA|C|311
3JA1|1|SA|C|312

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SP

30S ribosomal protein S16

Chain SQ

30S ribosomal protein S17