J4_3JAN_003
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCCAAG*CCCAGCCC*GAC*GGUAGCGG
- Length
- 25 nucleotides
- Bulged bases
- 3JAN|1|5|C|216, 3JAN|1|5|C|217, 3JAN|1|5|C|245
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|5|C|194
3JAN|1|5|C|195
3JAN|1|5|C|196
3JAN|1|5|A|197
3JAN|1|5|A|198
3JAN|1|5|G|199
*
3JAN|1|5|C|215
3JAN|1|5|C|216
3JAN|1|5|C|217
3JAN|1|5|A|218
3JAN|1|5|G|219
3JAN|1|5|C|220
3JAN|1|5|C|221
3JAN|1|5|C|222
*
3JAN|1|5|G|226
3JAN|1|5|A|227
3JAN|1|5|C|228
*
3JAN|1|5|G|240
3JAN|1|5|G|241
3JAN|1|5|U|242
3JAN|1|5|A|243
3JAN|1|5|G|244
3JAN|1|5|C|245
3JAN|1|5|G|246
3JAN|1|5|G|247
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- Ribosomal protein uL4
- Chain Y
- Ribosomal protein uL24
Coloring options: