J4_3JAN_005
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGUUC*GGUCAGU*AUC*GGCCGUAC
- Length
- 23 nucleotides
- Bulged bases
- 3JAN|1|5|C|2437, 3JAN|1|5|A|2438
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|5|G|2406
3JAN|1|5|G|2407
3JAN|1|5|U|2408
3JAN|1|5|U|2409
3JAN|1|5|C|2410
*
3JAN|1|5|G|2434
3JAN|1|5|G|2435
3JAN|1|5|U|2436
3JAN|1|5|C|2437
3JAN|1|5|A|2438
3JAN|1|5|G|2439
3JAN|1|5|U|2440
*
3JAN|1|5|A|2537
3JAN|1|5|U|2538
3JAN|1|5|C|2539
*
3JAN|1|5|G|2777
3JAN|1|5|G|2778
3JAN|1|5|C|2779
3JAN|1|5|C|2780
3JAN|1|5|G|2781
3JAN|1|5|U|2782
3JAN|1|5|A|2783
3JAN|1|5|C|2784
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain R
- Ribosomal protein eL19
- Chain X
- Ribosomal protein uL23
- Chain g
- Ribosomal protein eL34
- Chain h
- Ribosomal protein uL29
- Chain j
- Ribosomal protein eL37
- Chain k
- Ribosomal protein eL38
- Chain l
- Ribosomal protein eL39
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