J4_3JBN_008

3D structure

PDB id

3JBN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GG*UU*AGUAA*UAUCC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBN|1|AA|G|1829
3JBN|1|AA|G|1830
*
3JBN|1|AA|U|1848
3JBN|1|AA|U|1849
*
3JBN|1|AA|A|1972
3JBN|1|AA|G|1973
3JBN|1|AA|U|1974
3JBN|1|AA|A|1975
3JBN|1|AA|A|1976
*
3JBN|1|AA|U|1992
3JBN|1|AA|A|1993
3JBN|1|AA|U|1994
3JBN|1|AA|C|1995
3JBN|1|AA|C|1996

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AT

60S ribosomal protein eL19

Chain AX

60S ribosomal protein eL22

Chain Aa

60S ribosomal protein eL34

Chain Ad

60S ribosomal protein eL38