J4_3JBU_001

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAGUAAUGUC*GAUG*CUAG*CC

Length

20 nucleotides

Bulged bases

3JBU|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|115
3JBU|1|A|A|116
3JBU|1|A|G|117
3JBU|1|A|U|118
3JBU|1|A|A|119
3JBU|1|A|A|120
3JBU|1|A|U|121
3JBU|1|A|G|122
3JBU|1|A|U|123
3JBU|1|A|C|124
*
3JBU|1|A|G|237
3JBU|1|A|A|238
3JBU|1|A|U|239
3JBU|1|A|G|240
*
3JBU|1|A|C|286
3JBU|1|A|U|287
3JBU|1|A|A|288
3JBU|1|A|G|289
*
3JBU|1|A|C|311
3JBU|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain Q

30S ribosomal protein S17