J4_3JBU_010
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GUAGC*GCAC*GGGGUCGGA*UCUC
- Length
- 22 nucleotides
- Bulged bases
- 3JBU|1|v|U|8, 3JBU|1|v|U|47, 3JBU|1|v|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBU|1|v|G|7
3JBU|1|v|U|8
3JBU|1|v|A|9
3JBU|1|v|G|10
3JBU|1|v|C|11
*
3JBU|1|v|G|24
3JBU|1|v|C|25
3JBU|1|v|A|26
3JBU|1|v|C|27
*
3JBU|1|v|G|43
3JBU|1|v|G|44
3JBU|1|v|G|45
3JBU|1|v|G|46
3JBU|1|v|U|47
3JBU|1|v|C|48
3JBU|1|v|G|49
3JBU|1|v|G|50
3JBU|1|v|A|51
*
3JBU|1|v|U|63
3JBU|1|v|C|64
3JBU|1|v|U|65
3JBU|1|v|C|66
Current chains
- Chain v
- glycine-tRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain m
- 50S ribosomal protein L16
Coloring options: