J4_3JBV_002
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CGUAAAGCG*CGAAAG*CCGUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 3JBV|1|A|C|576, 3JBV|1|A|A|815, 3JBV|1|A|C|817, 3JBV|1|A|A|819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|A|C|569
3JBV|1|A|G|570
3JBV|1|A|U|571
3JBV|1|A|A|572
3JBV|1|A|A|573
3JBV|1|A|A|574
3JBV|1|A|G|575
3JBV|1|A|C|576
3JBV|1|A|G|577
*
3JBV|1|A|C|764
3JBV|1|A|G|765
3JBV|1|A|A|766
3JBV|1|A|A|767
3JBV|1|A|A|768
3JBV|1|A|G|769
*
3JBV|1|A|C|810
3JBV|1|A|C|811
3JBV|1|A|G|812
3JBV|1|A|U|813
3JBV|1|A|A|814
3JBV|1|A|A|815
3JBV|1|A|A|816
3JBV|1|A|C|817
3JBV|1|A|G|818
3JBV|1|A|A|819
3JBV|1|A|U|820
3JBV|1|A|G|821
*
3JBV|1|A|C|879
3JBV|1|A|C|880
3JBV|1|A|G|881
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
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