J4_3JBV_004

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

3JBV|1|b|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|C|268
3JBV|1|b|C|269
*
3JBV|1|b|G|370
3JBV|1|b|A|371
3JBV|1|b|G|372
3JBV|1|b|U|373
3JBV|1|b|A|374
3JBV|1|b|G|375
*
3JBV|1|b|U|399
3JBV|1|b|G|400
3JBV|1|b|A|401
3JBV|1|b|A|402
3JBV|1|b|U|403
3JBV|1|b|A|404
3JBV|1|b|U|405
3JBV|1|b|G|406
*
3JBV|1|b|C|421
3JBV|1|b|A|422
3JBV|1|b|A|423
3JBV|1|b|G|424

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain 0

50S ribosomal protein L28

Chain h

50S ribosomal protein L6