J4_3JCE_005

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAGG*CCGAAG*CGAG*CGUUAAG

Length

22 nucleotides

Bulged bases

3JCE|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|C|601
3JCE|1|A|A|602
3JCE|1|A|A|603
3JCE|1|A|G|604
3JCE|1|A|G|605
*
3JCE|1|A|C|623
3JCE|1|A|C|624
3JCE|1|A|G|625
3JCE|1|A|A|626
3JCE|1|A|A|627
3JCE|1|A|G|628
*
3JCE|1|A|C|635
3JCE|1|A|G|636
3JCE|1|A|A|637
3JCE|1|A|G|638
*
3JCE|1|A|C|650
3JCE|1|A|G|651
3JCE|1|A|U|652
3JCE|1|A|U|653
3JCE|1|A|A|654
3JCE|1|A|A|655
3JCE|1|A|G|656

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15