J4_3JCE_013

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGGC*GAC*GGAAG*UGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|G|2642
3JCE|1|A|G|2643
3JCE|1|A|G|2644
3JCE|1|A|G|2645
3JCE|1|A|C|2646
*
3JCE|1|A|G|2674
3JCE|1|A|A|2675
3JCE|1|A|C|2676
*
3JCE|1|A|G|2731
3JCE|1|A|G|2732
3JCE|1|A|A|2733
3JCE|1|A|A|2734
3JCE|1|A|G|2735
*
3JCE|1|A|U|2769
3JCE|1|A|G|2770
3JCE|1|A|C|2771
3JCE|1|A|C|2772

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14