J4_3OW2_001

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CC*GAGUAG*CGAAUAAC*GAAG

Length

20 nucleotides

Bulged bases

3OW2|1|0|A|411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3OW2_001 not in the Motif Atlas

Homologous match to J4_4V9F_001

Geometric discrepancy: 0.0342

The information below is about J4_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_94698.1

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW

Number of instances in this motif group

10

Unit IDs

3OW2|1|0|C|239
3OW2|1|0|C|240
*
3OW2|1|0|G|379
3OW2|1|0|A|380
3OW2|1|0|G|381
3OW2|1|0|U|382
3OW2|1|0|A|383
3OW2|1|0|G|384
*
3OW2|1|0|C|405
3OW2|1|0|G|406
3OW2|1|0|A|407
3OW2|1|0|A|408
3OW2|1|0|U|409
3OW2|1|0|A|410
3OW2|1|0|A|411
3OW2|1|0|C|412
*
3OW2|1|0|G|428
3OW2|1|0|A|429
3OW2|1|0|A|430
3OW2|1|0|G|431

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain L

50S ribosomal protein L15e