J4_3OW2_005

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UC*GGUUAG*CC*GUCCGUA

Length

17 nucleotides

Bulged bases

3OW2|1|0|U|1447

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3OW2_005 not in the Motif Atlas

Homologous match to J4_4V9F_005

Geometric discrepancy: 0.0354

The information below is about J4_4V9F_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_48150.1

Basepair signature

cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

8

Unit IDs

3OW2|1|0|U|1419
3OW2|1|0|C|1420
*
3OW2|1|0|G|1444
3OW2|1|0|G|1445
3OW2|1|0|U|1446
3OW2|1|0|U|1447
3OW2|1|0|A|1448
3OW2|1|0|G|1449
*
3OW2|1|0|C|1513
3OW2|1|0|C|1514
*
3OW2|1|0|G|1672
3OW2|1|0|U|1673
3OW2|1|0|C|1674
3OW2|1|0|C|1675
3OW2|1|0|G|1676
3OW2|1|0|U|1677
3OW2|1|0|A|1678

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L39e

Chain O

50S ribosomal protein L19e

Chain R

50S ribosomal protein L23P

Chain U

50S ribosomal protein L29P