J4_3OW2_008

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CUG*CG*CUUAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

3OW2|1|0|U|2012

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_3OW2_008 not in the Motif Atlas

Homologous match to J4_4V9F_008

Geometric discrepancy: 0.0657

The information below is about J4_4V9F_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_93343.1

Basepair signature

cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F

Number of instances in this motif group

4

Unit IDs

3OW2|1|0|C|1889
3OW2|1|0|U|1890
3OW2|1|0|G|1891
*
3OW2|1|0|C|1946
3OW2|1|0|G|1947
*
3OW2|1|0|C|1965
3OW2|1|0|U|1966
3OW2|1|0|U|1967
3OW2|1|0|A|1968
3OW2|1|0|A|1969
3OW2|1|0|G|1970
3OW2|1|0|G|1971
3OW2|1|0|U|1972
3OW2|1|0|A|1973
3OW2|1|0|G|1974
*
3OW2|1|0|U|2008
3OW2|1|0|G|2009
3OW2|1|0|A|2010
3OW2|1|0|A|2011
3OW2|1|0|U|2012
3OW2|1|0|G|2013

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain Y

50S ribosomal protein L37Ae