J4_4A2I_002

3D structure

PDB id

4A2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor

Experimental method

ELECTRON MICROSCOPY

Resolution

16.5 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4A2I|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4A2I|1|A|G|142
4A2I|1|A|A|143
4A2I|1|A|G|144
*
4A2I|1|A|C|178
4A2I|1|A|A|179
4A2I|1|A|U|180
4A2I|1|A|A|181
4A2I|1|A|A|182
4A2I|1|A|C|183
4A2I|1|A|G|184
*
4A2I|1|A|C|193
4A2I|1|A|C|194
4A2I|1|A|A|195
4A2I|1|A|A|196
4A2I|1|A|A|197
4A2I|1|A|G|198
*
4A2I|1|A|U|219
4A2I|1|A|G|220
4A2I|1|A|C|221

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20