J4_4ADV_002

3D structure

PDB id

4ADV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

13.5 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

4ADV|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ADV|1|A|G|142
4ADV|1|A|A|143
4ADV|1|A|G|144
*
4ADV|1|A|C|178
4ADV|1|A|A|179
4ADV|1|A|U|180
4ADV|1|A|A|181
4ADV|1|A|A|182
4ADV|1|A|C|183
4ADV|1|A|G|184
*
4ADV|1|A|C|193
4ADV|1|A|C|194
4ADV|1|A|A|195
4ADV|1|A|A|196
4ADV|1|A|A|197
4ADV|1|A|G|198
*
4ADV|1|A|U|219
4ADV|1|A|G|220
4ADV|1|A|C|221

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S RIBOSOMAL PROTEIN S20