J4_4CSU_003
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 4CSU|1|B|A|654
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4CSU_003 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.5633
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4CSU|1|B|C|601
4CSU|1|B|A|602
4CSU|1|B|A|603
4CSU|1|B|G|604
*
4CSU|1|B|C|624
4CSU|1|B|G|625
4CSU|1|B|A|626
4CSU|1|B|A|627
4CSU|1|B|G|628
*
4CSU|1|B|C|635
4CSU|1|B|G|636
4CSU|1|B|A|637
4CSU|1|B|G|638
*
4CSU|1|B|C|650
4CSU|1|B|G|651
4CSU|1|B|U|652
4CSU|1|B|U|653
4CSU|1|B|A|654
4CSU|1|B|A|655
4CSU|1|B|G|656
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 7
- 50S RIBOSOMAL PROTEIN L35
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain L
- 50S RIBOSOMAL PROTEIN L15
Coloring options: