J4_4CUV_002

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUAUG*CGUC*GAG*CGUGUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CUV|1|1|C|185
4CUV|1|1|U|186
4CUV|1|1|A|187
4CUV|1|1|U|188
4CUV|1|1|G|189
*
4CUV|1|1|C|205
4CUV|1|1|G|206
4CUV|1|1|U|207
4CUV|1|1|C|208
*
4CUV|1|1|G|212
4CUV|1|1|A|213
4CUV|1|1|G|214
*
4CUV|1|1|C|226
4CUV|1|1|G|227
4CUV|1|1|U|228
4CUV|1|1|G|229
4CUV|1|1|U|230
4CUV|1|1|G|231

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S RRNA