J4_4CXE_003

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGUUC*GGUCAG*UC*GGCCGUAC

Length

21 nucleotides

Bulged bases

4CXE|1|2|C|2414, 4CXE|1|2|A|2415

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|2383
4CXE|1|2|G|2384
4CXE|1|2|U|2385
4CXE|1|2|U|2386
4CXE|1|2|C|2387
*
4CXE|1|2|G|2411
4CXE|1|2|G|2412
4CXE|1|2|U|2413
4CXE|1|2|C|2414
4CXE|1|2|A|2415
4CXE|1|2|G|2416
*
4CXE|1|2|U|2515
4CXE|1|2|C|2516
*
4CXE|1|2|G|2754
4CXE|1|2|G|2755
4CXE|1|2|C|2756
4CXE|1|2|C|2757
4CXE|1|2|G|2758
4CXE|1|2|U|2759
4CXE|1|2|A|2760
4CXE|1|2|C|2761

Current chains

Chain 2

28S RRNA

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA