J4_4CXE_006

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GACUG*CAAAG*UGAUU*AUGAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|3603
4CXE|1|2|A|3604
4CXE|1|2|C|3605
4CXE|1|2|U|3606
4CXE|1|2|G|3607
*
4CXE|1|2|C|3619
4CXE|1|2|A|3620
4CXE|1|2|A|3621
4CXE|1|2|A|3622
4CXE|1|2|G|3623
*
4CXE|1|2|U|3659
4CXE|1|2|G|3660
4CXE|1|2|A|3661
4CXE|1|2|U|3662
4CXE|1|2|U|3663
*
4CXE|1|2|A|3790
4CXE|1|2|U|3791
4CXE|1|2|G|3792
4CXE|1|2|A|3793
4CXE|1|2|A|3794
4CXE|1|2|C|3795

Current chains

Chain 2

28S RRNA

Nearby chains