J4_4CXE_007

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CUG*CGG*CUUAAGGUAG*UGAAUG

Length

22 nucleotides

Bulged bases

4CXE|1|2|U|3787

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|3665
4CXE|1|2|U|3666
4CXE|1|2|G|3667
*
4CXE|1|2|C|3721
4CXE|1|2|G|3722
4CXE|1|2|G|3723
*
4CXE|1|2|C|3740
4CXE|1|2|U|3741
4CXE|1|2|U|3742
4CXE|1|2|A|3743
4CXE|1|2|A|3744
4CXE|1|2|G|3745
4CXE|1|2|G|3746
4CXE|1|2|U|3747
4CXE|1|2|A|3748
4CXE|1|2|G|3749
*
4CXE|1|2|U|3783
4CXE|1|2|G|3784
4CXE|1|2|A|3785
4CXE|1|2|A|3786
4CXE|1|2|U|3787
4CXE|1|2|G|3788

Current chains

Chain 2

28S RRNA

Nearby chains