J4_4CXE_008

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CUAAG*UUGAU*ACC*GGG

Length

16 nucleotides

Bulged bases

4CXE|1|2|A|4194, 4CXE|1|2|G|4289

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|4191
4CXE|1|2|U|4192
4CXE|1|2|A|4193
4CXE|1|2|A|4194
4CXE|1|2|G|4195
*
4CXE|1|2|U|4249
4CXE|1|2|U|4250
4CXE|1|2|G|4251
4CXE|1|2|A|4252
4CXE|1|2|U|4253
*
4CXE|1|2|A|4277
4CXE|1|2|C|4278
4CXE|1|2|C|4279
*
4CXE|1|2|G|4288
4CXE|1|2|G|4289
4CXE|1|2|G|4290

Current chains

Chain 2

28S RRNA

Nearby chains