J4_4CXE_009

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GUAAUC*GUUC*GUG*CGCC

Length

17 nucleotides

Bulged bases

4CXE|1|2|A|4549

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|4547
4CXE|1|2|U|4548
4CXE|1|2|A|4549
4CXE|1|2|A|4550
4CXE|1|2|U|4551
4CXE|1|2|C|4552
*
4CXE|1|2|G|4578
4CXE|1|2|U|4579
4CXE|1|2|U|4580
4CXE|1|2|C|4581
*
4CXE|1|2|G|4636
4CXE|1|2|U|4637
4CXE|1|2|G|4638
*
4CXE|1|2|C|4672
4CXE|1|2|G|4673
4CXE|1|2|C|4674
4CXE|1|2|C|4675

Current chains

Chain 2

28S RRNA

Nearby chains