J4_4LEL_015

3D structure

PDB id

4LEL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GAGUAACG*UC*GUAG*CC

Length

16 nucleotides

Bulged bases

4LEL|1|XA|C|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_4LEL_015 not in the Motif Atlas

Homologous match to J4_4LFB_001

Geometric discrepancy: 0.0889

The information below is about J4_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_35578.3

Basepair signature

cWW-F-cWW-F-F-F-tHW-F-cWW-cWW

Number of instances in this motif group

2

Unit IDs

4LEL|1|XA|G|115
4LEL|1|XA|A|116
4LEL|1|XA|G|117
4LEL|1|XA|U|118
4LEL|1|XA|A|119
4LEL|1|XA|A|120
4LEL|1|XA|C|121
4LEL|1|XA|G|122
*
4LEL|1|XA|U|239
4LEL|1|XA|C|240
*
4LEL|1|XA|G|286
4LEL|1|XA|U|287
4LEL|1|XA|A|288
4LEL|1|XA|G|289
*
4LEL|1|XA|C|311
4LEL|1|XA|C|312

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XP

30S ribosomal protein S16

Chain XQ

30S ribosomal protein S17