3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGG*CGAAAG*CCCUAAACGAUG*CC
Length
23 nucleotides
Bulged bases
4LEL|1|XA|A|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_4LEL_017 not in the Motif Atlas
Homologous match to J4_4LFB_003
Geometric discrepancy: 0.0815
The information below is about J4_4LFB_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_61885.6
Basepair signature
cWW-cWW-cWW-F-F-tHW-F-F-F-F-F-cWW-F-F
Number of instances in this motif group
4

Unit IDs

4LEL|1|XA|G|575
4LEL|1|XA|G|576
4LEL|1|XA|G|577
*
4LEL|1|XA|C|764
4LEL|1|XA|G|765
4LEL|1|XA|A|766
4LEL|1|XA|A|767
4LEL|1|XA|A|768
4LEL|1|XA|G|769
*
4LEL|1|XA|C|810
4LEL|1|XA|C|811
4LEL|1|XA|C|812
4LEL|1|XA|U|813
4LEL|1|XA|A|814
4LEL|1|XA|A|815
4LEL|1|XA|A|816
4LEL|1|XA|C|817
4LEL|1|XA|G|818
4LEL|1|XA|A|819
4LEL|1|XA|U|820
4LEL|1|XA|G|821
*
4LEL|1|XA|C|879
4LEL|1|XA|C|880

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XH
30S ribosomal protein S8
Chain XK
30S ribosomal protein S11
Chain XL
30S ribosomal protein S12
Chain XO
30S ribosomal protein S15
Chain XQ
30S ribosomal protein S17
Chain YA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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