3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGGC*GAC*GGAAG*CGC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J4_4LEL_028 not in the Motif Atlas
Homologous match to J4_9DFE_010
Geometric discrepancy: 0.0974
The information below is about J4_9DFE_010
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_77044.4
Basepair signature
cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
Number of instances in this motif group
3

Unit IDs

4LEL|1|YA|G|2643
4LEL|1|YA|G|2644
4LEL|1|YA|G|2645
4LEL|1|YA|C|2646
*
4LEL|1|YA|G|2674
4LEL|1|YA|A|2675
4LEL|1|YA|C|2676
*
4LEL|1|YA|G|2731
4LEL|1|YA|G|2732
4LEL|1|YA|A|2733
4LEL|1|YA|A|2734
4LEL|1|YA|G|2735
*
4LEL|1|YA|C|2769
4LEL|1|YA|G|2770
4LEL|1|YA|C|2771

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13
Chain YO
50S ribosomal protein L14

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1309 s