J4_4U1V_010
3D structure
- PDB id
- 4U1V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to linopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GG*UU*AC*GC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4U1V_010 not in the Motif Atlas
- Homologous match to J4_5J7L_024
- Geometric discrepancy: 0.0761
- The information below is about J4_5J7L_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_24280.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4U1V|1|BA|G|1444
4U1V|1|BA|G|1445
*
4U1V|1|BA|U|1466
4U1V|1|BA|U|1467
*
4U1V|1|BA|A|1525
4U1V|1|BA|C|1526
*
4U1V|1|BA|G|1546
4U1V|1|BA|C|1547
Current chains
- Chain BA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: