J4_4UG0_010

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAAGG*CUUG*CC*GGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|C|4231
4UG0|1|L5|U|4232
4UG0|1|L5|A|4233
4UG0|1|L5|A|4234
4UG0|1|L5|G|4235
4UG0|1|L5|G|4236
*
4UG0|1|L5|C|4288
4UG0|1|L5|U|4289
4UG0|1|L5|U|4290
4UG0|1|L5|G|4291
*
4UG0|1|L5|C|4318
4UG0|1|L5|C|4319
*
4UG0|1|L5|G|4328
4UG0|1|L5|G|4329
4UG0|1|L5|G|4330

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LD

60S RIBOSOMAL PROTEIN L5

Chain LT

60S RIBOSOMAL PROTEIN L21

Chain Lo

60S RIBOSOMAL PROTEIN L36A