J4_4UG0_012
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAGUCCACUUUAAAUCCUUCCGCGAGGAUCCAU*AUAG
- Length
- 54 nucleotides
- Bulged bases
- 4UG0|1|S2|A|590, 4UG0|1|S2|C|592, 4UG0|1|S2|C|593
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S2|C|30
4UG0|1|S2|U|31
4UG0|1|S2|U|32
4UG0|1|S2|G|33
4UG0|1|S2|U|34
*
4UG0|1|S2|A|521
4UG0|1|S2|A|522
4UG0|1|S2|A|523
4UG0|1|S2|U|524
4UG0|1|S2|A|525
4UG0|1|S2|A|526
4UG0|1|S2|C|527
*
4UG0|1|S2|G|558
4UG0|1|S2|G|559
4UG0|1|S2|A|560
4UG0|1|S2|A|561
4UG0|1|S2|U|562
4UG0|1|S2|G|563
4UG0|1|S2|A|564
4UG0|1|S2|G|565
4UG0|1|S2|U|566
4UG0|1|S2|C|567
4UG0|1|S2|C|568
4UG0|1|S2|A|569
4UG0|1|S2|C|570
4UG0|1|S2|U|571
4UG0|1|S2|U|572
4UG0|1|S2|U|573
4UG0|1|S2|A|574
4UG0|1|S2|A|575
4UG0|1|S2|A|576
4UG0|1|S2|U|577
4UG0|1|S2|C|578
4UG0|1|S2|C|579
4UG0|1|S2|U|580
4UG0|1|S2|U|581
4UG0|1|S2|C|582
4UG0|1|S2|C|583
4UG0|1|S2|G|584
4UG0|1|S2|C|585
4UG0|1|S2|G|586
4UG0|1|S2|A|587
4UG0|1|S2|G|588
4UG0|1|S2|G|589
4UG0|1|S2|A|590
4UG0|1|S2|U|591
4UG0|1|S2|C|592
4UG0|1|S2|C|593
4UG0|1|S2|A|594
4UG0|1|S2|U|595
*
4UG0|1|S2|A|641
4UG0|1|S2|U|642
4UG0|1|S2|A|643
4UG0|1|S2|G|644
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- 40S RIBOSOMAL PROTEIN S9
- Chain SX
- 40S RIBOSOMAL PROTEIN S23
- Chain SY
- 40S RIBOSOMAL PROTEIN S24
- Chain Se
- 40S RIBOSOMAL PROTEIN S30
Coloring options: