J4_4UG0_013
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAUG*CGAAUGGC*GAG*CACAUCCAAGGAAGGCAG
- Length
- 33 nucleotides
- Bulged bases
- 4UG0|1|S2|A|92, 4UG0|1|S2|A|464, 4UG0|1|S2|C|472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S2|C|53
4UG0|1|S2|A|54
4UG0|1|S2|U|55
4UG0|1|S2|G|56
*
4UG0|1|S2|C|89
4UG0|1|S2|G|90
4UG0|1|S2|A|91
4UG0|1|S2|A|92
4UG0|1|S2|U|93
4UG0|1|S2|G|94
4UG0|1|S2|G|95
4UG0|1|S2|C|96
*
4UG0|1|S2|G|434
4UG0|1|S2|A|435
4UG0|1|S2|G|436
*
4UG0|1|S2|C|457
4UG0|1|S2|A|458
4UG0|1|S2|C|459
4UG0|1|S2|A|460
4UG0|1|S2|U|461
4UG0|1|S2|C|462
4UG0|1|S2|C|463
4UG0|1|S2|A|464
4UG0|1|S2|A|465
4UG0|1|S2|G|466
4UG0|1|S2|G|467
4UG0|1|S2|A|468
4UG0|1|S2|A|469
4UG0|1|S2|G|470
4UG0|1|S2|G|471
4UG0|1|S2|C|472
4UG0|1|S2|A|473
4UG0|1|S2|G|474
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LV
- 60S RIBOSOMAL PROTEIN L23
- Chain SE
- 40S RIBOSOMAL PROTEIN S4, X ISOFORM
- Chain SG
- 40S RIBOSOMAL PROTEIN S6
- Chain SI
- 40S RIBOSOMAL PROTEIN S8
- Chain SJ
- 40S RIBOSOMAL PROTEIN S9
- Chain SY
- 40S RIBOSOMAL PROTEIN S24
Coloring options: