J4_4UJE_004
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UC*GGUCAG*UC*GGCCGUA
- Length
- 17 nucleotides
- Bulged bases
- 4UJE|1|A2|C|2414, 4UJE|1|A2|A|2415
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|A2|U|2386
4UJE|1|A2|C|2387
*
4UJE|1|A2|G|2411
4UJE|1|A2|G|2412
4UJE|1|A2|U|2413
4UJE|1|A2|C|2414
4UJE|1|A2|A|2415
4UJE|1|A2|G|2416
*
4UJE|1|A2|U|2515
4UJE|1|A2|C|2516
*
4UJE|1|A2|G|2754
4UJE|1|A2|G|2755
4UJE|1|A2|C|2756
4UJE|1|A2|C|2757
4UJE|1|A2|G|2758
4UJE|1|A2|U|2759
4UJE|1|A2|A|2760
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CR
- 60S RIBOSOMAL PROTEIN L19
- Chain CX
- 60S RIBOSOMAL PROTEIN L23A
- Chain Cg
- 60S RIBOSOMAL PROTEIN L34
- Chain Ck
- 60S RIBOSOMAL PROTEIN L38
- Chain Cl
- 60S RIBOSOMAL PROTEIN L39
Coloring options: