J4_4UJE_009

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GUAAUC*GUUC*GUG*CGCC

Length

17 nucleotides

Bulged bases

4UJE|1|A2|A|4549

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|4547
4UJE|1|A2|U|4548
4UJE|1|A2|A|4549
4UJE|1|A2|A|4550
4UJE|1|A2|U|4551
4UJE|1|A2|C|4552
*
4UJE|1|A2|G|4578
4UJE|1|A2|U|4579
4UJE|1|A2|U|4580
4UJE|1|A2|C|4581
*
4UJE|1|A2|G|4636
4UJE|1|A2|U|4637
4UJE|1|A2|G|4638
*
4UJE|1|A2|C|4672
4UJE|1|A2|G|4673
4UJE|1|A2|C|4674
4UJE|1|A2|C|4675

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CB

60S RIBOSOMAL PROTEIN L3

Chain CO

60S RIBOSOMAL PROTEIN L13A

Chain CV

60S RIBOSOMAL PROTEIN L23