J4_4UJE_013
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUUAAAAAG*CGAAAG*CCAUAAACGAUG*UUC
- Length
- 30 nucleotides
- Bulged bases
- 4UJE|1|B1|A|668, 4UJE|1|B1|A|672, 4UJE|1|B1|A|1083, 4UJE|1|B1|G|1086, 4UJE|1|B1|U|1088
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|B1|G|665
4UJE|1|B1|U|666
4UJE|1|B1|U|667
4UJE|1|B1|A|668
4UJE|1|B1|A|669
4UJE|1|B1|A|670
4UJE|1|B1|A|671
4UJE|1|B1|A|672
4UJE|1|B1|G|673
*
4UJE|1|B1|C|1032
4UJE|1|B1|G|1033
4UJE|1|B1|A|1034
4UJE|1|B1|A|1035
4UJE|1|B1|A|1036
4UJE|1|B1|G|1037
*
4UJE|1|B1|C|1078
4UJE|1|B1|C|1079
4UJE|1|B1|A|1080
4UJE|1|B1|U|1081
4UJE|1|B1|A|1082
4UJE|1|B1|A|1083
4UJE|1|B1|A|1084
4UJE|1|B1|C|1085
4UJE|1|B1|G|1086
4UJE|1|B1|A|1087
4UJE|1|B1|U|1088
4UJE|1|B1|G|1089
*
4UJE|1|B1|U|1160
4UJE|1|B1|U|1161
4UJE|1|B1|C|1162
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 40S RIBOSOMAL PROTEIN S2
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain BN
- 40S RIBOSOMAL PROTEIN S13
- Chain BW
- 40S RIBOSOMAL PROTEIN S15A
- Chain BX
- 40S RIBOSOMAL PROTEIN S23
- Chain Ba
- 40S RIBOSOMAL PROTEIN S26
- Chain Cn
- 60S RIBOSOMAL PROTEIN L41
- Chain Cp
- 60S RIBOSOMAL PROTEIN L37A
Coloring options: