J4_4UJE_014
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UGGA*UACACUG*CGUGAUGGGGAUCG*CAUGAACGAGGAA
- Length
- 38 nucleotides
- Bulged bases
- 4UJE|1|B1|U|1535, 4UJE|1|B1|G|1600, 4UJE|1|B1|U|1602, 4UJE|1|B1|G|1603
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|B1|U|1225
4UJE|1|B1|G|1226
4UJE|1|B1|G|1227
4UJE|1|B1|A|1228
*
4UJE|1|B1|U|1530
4UJE|1|B1|A|1531
4UJE|1|B1|C|1532
4UJE|1|B1|A|1533
4UJE|1|B1|C|1534
4UJE|1|B1|U|1535
4UJE|1|B1|G|1536
*
4UJE|1|B1|C|1597
4UJE|1|B1|G|1598
4UJE|1|B1|U|1599
4UJE|1|B1|G|1600
4UJE|1|B1|A|1601
4UJE|1|B1|U|1602
4UJE|1|B1|G|1603
4UJE|1|B1|G|1604
4UJE|1|B1|G|1605
4UJE|1|B1|G|1606
4UJE|1|B1|A|1607
4UJE|1|B1|U|1608
4UJE|1|B1|C|1609
4UJE|1|B1|G|1610
*
4UJE|1|B1|C|1629
4UJE|1|B1|A|1630
4UJE|1|B1|U|1631
4UJE|1|B1|G|1632
4UJE|1|B1|A|1633
4UJE|1|B1|A|1634
4UJE|1|B1|C|1635
4UJE|1|B1|G|1636
4UJE|1|B1|A|1637
4UJE|1|B1|G|1638
4UJE|1|B1|G|1639
4UJE|1|B1|A|1640
4UJE|1|B1|A|1641
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain AW
- Transfer RNA; tRNA
- Chain BF
- 40S RIBOSOMAL PROTEIN S5
- Chain BQ
- 40S RIBOSOMAL PROTEIN S16
- Chain BS
- 40S RIBOSOMAL PROTEIN S18
- Chain BT
- 40S RIBOSOMAL PROTEIN S19
- Chain BZ
- 40S RIBOSOMAL PROTEIN S25
Coloring options: