J4_4UJE_016

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GG*UGUGAAGGGCAG*CGUGCCUUGGAAAG*UC

Length

30 nucleotides

Bulged bases

4UJE|1|A2|A|2673

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|2595
4UJE|1|A2|G|2596
*
4UJE|1|A2|U|2614
4UJE|1|A2|G|2615
4UJE|1|A2|U|2616
4UJE|1|A2|G|2617
4UJE|1|A2|A|2618
4UJE|1|A2|A|2619
4UJE|1|A2|G|2620
4UJE|1|A2|G|2621
4UJE|1|A2|G|2622
4UJE|1|A2|C|2623
4UJE|1|A2|A|2624
4UJE|1|A2|G|2625
*
4UJE|1|A2|C|2662
4UJE|1|A2|G|2663
4UJE|1|A2|U|2664
4UJE|1|A2|G|2665
4UJE|1|A2|C|2666
4UJE|1|A2|C|2667
4UJE|1|A2|U|2668
4UJE|1|A2|U|2669
4UJE|1|A2|G|2670
4UJE|1|A2|G|2671
4UJE|1|A2|A|2672
4UJE|1|A2|A|2673
4UJE|1|A2|A|2674
4UJE|1|A2|G|2675
*
4UJE|1|A2|U|2695
4UJE|1|A2|C|2696

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CR

60S RIBOSOMAL PROTEIN L19

Chain CU

60S RIBOSOMAL PROTEIN L22

Chain Cg

60S RIBOSOMAL PROTEIN L34

Chain Ck

60S RIBOSOMAL PROTEIN L38