J4_4UY8_002
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAAG*CGCG*CAG*CGUAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_4UY8_002 not in the Motif Atlas
- Homologous match to J4_5J7L_019
- Geometric discrepancy: 0.0701
- The information below is about J4_5J7L_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
4UY8|1|A|G|297
4UY8|1|A|G|298
4UY8|1|A|A|299
4UY8|1|A|A|300
4UY8|1|A|G|301
*
4UY8|1|A|C|316
4UY8|1|A|G|317
4UY8|1|A|C|318
4UY8|1|A|G|319
*
4UY8|1|A|C|323
4UY8|1|A|A|324
4UY8|1|A|G|325
*
4UY8|1|A|C|337
4UY8|1|A|G|338
4UY8|1|A|U|339
4UY8|1|A|A|340
4UY8|1|A|C|341
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain U
- 50S RIBOSOMAL PROTEIN L24
Coloring options: