J4_4V49_013

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CAAAGG*CUUGAC*GGG*CGG

Length

18 nucleotides

Bulged bases

4V49|1|B0|A|2265, 4V49|1|B0|A|2267, 4V49|1|B0|U|2323, 4V49|1|B0|G|2361

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V49|1|B0|C|2264
4V49|1|B0|A|2265
4V49|1|B0|A|2266
4V49|1|B0|A|2267
4V49|1|B0|G|2268
4V49|1|B0|G|2269
*
4V49|1|B0|C|2321
4V49|1|B0|U|2322
4V49|1|B0|U|2323
4V49|1|B0|G|2324
4V49|1|B0|A|2325
4V49|1|B0|C|2326
*
4V49|1|B0|G|2349
4V49|1|B0|G|2350
4V49|1|B0|G|2351
*
4V49|1|B0|C|2360
4V49|1|B0|G|2361
4V49|1|B0|G|2362

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BU

50S ribosomal protein L27