3D structure

PDB id
4V4A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
9.5 Å

Loop

Sequence
CAAAGG*CUUGAC*GGG*CGG
Length
18 nucleotides
Bulged bases
4V4A|1|B0|A|2265, 4V4A|1|B0|A|2267, 4V4A|1|B0|U|2323, 4V4A|1|B0|G|2361
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4A|1|B0|C|2264
4V4A|1|B0|A|2265
4V4A|1|B0|A|2266
4V4A|1|B0|A|2267
4V4A|1|B0|G|2268
4V4A|1|B0|G|2269
*
4V4A|1|B0|C|2321
4V4A|1|B0|U|2322
4V4A|1|B0|U|2323
4V4A|1|B0|G|2324
4V4A|1|B0|A|2325
4V4A|1|B0|C|2326
*
4V4A|1|B0|G|2349
4V4A|1|B0|G|2350
4V4A|1|B0|G|2351
*
4V4A|1|B0|C|2360
4V4A|1|B0|G|2361
4V4A|1|B0|G|2362

Current chains

Chain B0
23S RIBOSOMAL RNA

Nearby chains

Chain B1
50S ribosomal protein L33
Chain B3
50S ribosomal protein L35
Chain BU
50S ribosomal protein L27

Coloring options:

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