J4_4V4P_008

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GAGG*CCAUGUG*CAAAG*CGC

Length

19 nucleotides

Bulged bases

4V4P|1|BA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|BA|G|142
4V4P|1|BA|A|143
4V4P|1|BA|G|144
4V4P|1|BA|G|145
*
4V4P|1|BA|C|177
4V4P|1|BA|C|178
4V4P|1|BA|A|179
4V4P|1|BA|U|180
4V4P|1|BA|G|181
4V4P|1|BA|U|182
4V4P|1|BA|G|183
*
4V4P|1|BA|C|194
4V4P|1|BA|A|195
4V4P|1|BA|A|196
4V4P|1|BA|A|197
4V4P|1|BA|G|198
*
4V4P|1|BA|C|219
4V4P|1|BA|G|220
4V4P|1|BA|C|221

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BW

30S ribosomal protein S20