J4_4V4S_011
3D structure
- PDB id
- 4V4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.76 Å
Loop
- Sequence
- UUUA*UUUGACUGGGGCGGUCGC*GCG*CGGAUAAAA
- Length
- 34 nucleotides
- Bulged bases
- 4V4S|1|BA|U|2076, 4V4S|1|BA|G|2250, 4V4S|1|BA|G|2428, 4V4S|1|BA|G|2429, 4V4S|1|BA|A|2430, 4V4S|1|BA|U|2431, 4V4S|1|BA|A|2432, 4V4S|1|BA|A|2433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4S|1|BA|U|2074
4V4S|1|BA|U|2075
4V4S|1|BA|U|2076
4V4S|1|BA|A|2077
*
4V4S|1|BA|U|2243
4V4S|1|BA|U|2244
4V4S|1|BA|U|2245
4V4S|1|BA|G|2246
4V4S|1|BA|A|2247
4V4S|1|BA|C|2248
4V4S|1|BA|U|2249
4V4S|1|BA|G|2250
4V4S|1|BA|G|2251
4V4S|1|BA|G|2252
4V4S|1|BA|G|2253
4V4S|1|BA|C|2254
4V4S|1|BA|G|2255
4V4S|1|BA|G|2256
4V4S|1|BA|U|2257
4V4S|1|BA|C|2258
4V4S|1|BA|G|2259
4V4S|1|BA|C|2260
*
4V4S|1|BA|G|2280
4V4S|1|BA|C|2281
4V4S|1|BA|G|2282
*
4V4S|1|BA|C|2427
4V4S|1|BA|G|2428
4V4S|1|BA|G|2429
4V4S|1|BA|A|2430
4V4S|1|BA|U|2431
4V4S|1|BA|A|2432
4V4S|1|BA|A|2433
4V4S|1|BA|A|2434
4V4S|1|BA|A|2435
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain AW
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L27
- Chain B4
- 50S ribosomal protein L31
- Chain B6
- 50S ribosomal protein L33
- Chain B8
- 50S ribosomal protein L35
- Chain BD
- 50S ribosomal protein L2
- Chain BQ
- 50S ribosomal protein L16
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