J4_4V4S_016

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

CUAGCCGAAG*CGCC*GAG*CGUAGGCGAAAG

Length

29 nucleotides

Bulged bases

4V4S|1|BA|G|338, 4V4S|1|BA|G|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|C|292
4V4S|1|BA|U|293
4V4S|1|BA|A|294
4V4S|1|BA|G|295
4V4S|1|BA|C|296
4V4S|1|BA|C|297
4V4S|1|BA|G|298
4V4S|1|BA|A|299
4V4S|1|BA|A|300
4V4S|1|BA|G|301
*
4V4S|1|BA|C|316
4V4S|1|BA|G|317
4V4S|1|BA|C|318
4V4S|1|BA|C|319
*
4V4S|1|BA|G|323
4V4S|1|BA|A|324
4V4S|1|BA|G|325
*
4V4S|1|BA|C|337
4V4S|1|BA|G|338
4V4S|1|BA|U|339
4V4S|1|BA|A|340
4V4S|1|BA|G|341
4V4S|1|BA|G|342
4V4S|1|BA|C|343
4V4S|1|BA|G|344
4V4S|1|BA|A|345
4V4S|1|BA|A|346
4V4S|1|BA|A|347
4V4S|1|BA|G|348

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L4

Chain BY

50S ribosomal protein 24