J4_4V4V_016
3D structure
- PDB id
- 4V4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- GGGC*GACGCA*UGCGGAG*UGC
- Length
- 20 nucleotides
- Bulged bases
- 4V4V|1|B0|G|2644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4V|1|B0|G|2643
4V4V|1|B0|G|2644
4V4V|1|B0|G|2645
4V4V|1|B0|C|2646
*
4V4V|1|B0|G|2674
4V4V|1|B0|A|2675
4V4V|1|B0|C|2676
4V4V|1|B0|G|2677
4V4V|1|B0|C|2678
4V4V|1|B0|A|2679
*
4V4V|1|B0|U|2728
4V4V|1|B0|G|2729
4V4V|1|B0|C|2730
4V4V|1|B0|G|2731
4V4V|1|B0|G|2732
4V4V|1|B0|A|2734
4V4V|1|B0|G|2735
*
4V4V|1|B0|U|2769
4V4V|1|B0|G|2770
4V4V|1|B0|C|2771
Current chains
- Chain B0
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 50S ribosomal protein L3
- Chain BH
- 50S ribosomal protein L13
- Chain BI
- 50S ribosomal protein L14
Coloring options: