J4_4V57_009

3D structure

PDB id

4V57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

4V57|1|BB|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V57|1|BB|U|1313
4V57|1|BB|C|1314
*
4V57|1|BB|G|1338
4V57|1|BB|G|1339
4V57|1|BB|U|1340
4V57|1|BB|G|1341
4V57|1|BB|A|1342
4V57|1|BB|G|1343
*
4V57|1|BB|C|1404
4V57|1|BB|U|1405
*
4V57|1|BB|A|1597
4V57|1|BB|A|1598
4V57|1|BB|U|1599
4V57|1|BB|C|1600
4V57|1|BB|G|1601
4V57|1|BB|U|1602
4V57|1|BB|A|1603

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BT

50S ribosomal protein L23