J4_4V66_004

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UUAG*CGC*GAGGUCCU*AGA

Length

18 nucleotides

Bulged bases

4V66|1|AA|U|8, 4V66|1|AA|U|47, 4V66|1|AA|C|48

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|AA|U|7
4V66|1|AA|U|8
4V66|1|AA|A|9
4V66|1|AA|G|10
*
4V66|1|AA|C|25
4V66|1|AA|G|26
4V66|1|AA|C|27
*
4V66|1|AA|G|43
4V66|1|AA|A|44
4V66|1|AA|G|45
4V66|1|AA|G|46
4V66|1|AA|U|47
4V66|1|AA|C|48
4V66|1|AA|C|49
4V66|1|AA|U|50
*
4V66|1|AA|A|64
4V66|1|AA|G|65
4V66|1|AA|A|66

Current chains

Chain AA

A/T, P and E-site tRNAs

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain AD

30S ribosomal protein S12

Chain BB

Large subunit ribosomal RNA; LSU rRNA