J4_4V66_008

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CAAGGUUAAC*GGGAGCCGAAG*CGAG*CGUUAAG

Length

32 nucleotides

Bulged bases

4V66|1|BB|U|653, 4V66|1|BB|A|654

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|C|601
4V66|1|BB|A|602
4V66|1|BB|A|603
4V66|1|BB|G|604
4V66|1|BB|G|605
4V66|1|BB|U|606
4V66|1|BB|U|607
4V66|1|BB|A|608
4V66|1|BB|A|609
4V66|1|BB|C|610
*
4V66|1|BB|G|618
4V66|1|BB|G|619
4V66|1|BB|G|620
4V66|1|BB|A|621
4V66|1|BB|G|622
4V66|1|BB|C|623
4V66|1|BB|C|624
4V66|1|BB|G|625
4V66|1|BB|A|626
4V66|1|BB|A|627
4V66|1|BB|G|628
*
4V66|1|BB|C|635
4V66|1|BB|G|636
4V66|1|BB|A|637
4V66|1|BB|G|638
*
4V66|1|BB|C|650
4V66|1|BB|G|651
4V66|1|BB|U|652
4V66|1|BB|U|653
4V66|1|BB|A|654
4V66|1|BB|A|655
4V66|1|BB|G|656

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B1

50S ribosomal protein L4

Chain BE

50S ribosomal protein L15

Chain BW

50S ribosomal protein L35