J4_4V66_009

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGUUCCUGUC*GGCAGGGUGAG*CU*AAUCGUACC

Length

32 nucleotides

Bulged bases

4V66|1|BB|U|1313, 4V66|1|BB|G|1341, 4V66|1|BB|A|1598, 4V66|1|BB|U|1599

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|1310
4V66|1|BB|G|1311
4V66|1|BB|U|1312
4V66|1|BB|U|1313
4V66|1|BB|C|1314
4V66|1|BB|C|1315
4V66|1|BB|U|1316
4V66|1|BB|G|1317
4V66|1|BB|U|1318
4V66|1|BB|C|1319
*
4V66|1|BB|G|1333
4V66|1|BB|G|1334
4V66|1|BB|C|1335
4V66|1|BB|A|1336
4V66|1|BB|G|1337
4V66|1|BB|G|1338
4V66|1|BB|G|1339
4V66|1|BB|U|1340
4V66|1|BB|G|1341
4V66|1|BB|A|1342
4V66|1|BB|G|1343
*
4V66|1|BB|C|1404
4V66|1|BB|U|1405
*
4V66|1|BB|A|1597
4V66|1|BB|A|1598
4V66|1|BB|U|1599
4V66|1|BB|C|1600
4V66|1|BB|G|1601
4V66|1|BB|U|1602
4V66|1|BB|A|1603
4V66|1|BB|C|1604
4V66|1|BB|C|1605

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BM

50S ribosomal protein L23

Chain BQ

50S ribosomal protein L29

Chain BV

50S ribosomal protein L34