J4_4V68_009

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCG

Length

17 nucleotides

Bulged bases

4V68|1|BA|A|603, 4V68|1|BA|C|652

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|BA|C|601
4V68|1|BA|G|602
4V68|1|BA|A|603
4V68|1|BA|G|604
*
4V68|1|BA|C|624
4V68|1|BA|G|625
4V68|1|BA|U|626
4V68|1|BA|A|627
4V68|1|BA|G|628
*
4V68|1|BA|C|635
4V68|1|BA|G|636
4V68|1|BA|A|637
4V68|1|BA|G|638
*
4V68|1|BA|C|650
4V68|1|BA|G|651
4V68|1|BA|C|652
4V68|1|BA|G|656

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B8

50S ribosomal protein L35

Chain BF

50S ribosomal protein L4

Chain BP

50S ribosomal protein L15