J4_4V6K_010

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

GGGCU*GGAC*GGAAG*UGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|G|2643
4V6K|1|AB|G|2644
4V6K|1|AB|G|2645
4V6K|1|AB|C|2646
4V6K|1|AB|U|2647
*
4V6K|1|AB|G|2673
4V6K|1|AB|G|2674
4V6K|1|AB|A|2675
4V6K|1|AB|C|2676
*
4V6K|1|AB|G|2731
4V6K|1|AB|G|2732
4V6K|1|AB|A|2733
4V6K|1|AB|A|2734
4V6K|1|AB|G|2735
*
4V6K|1|AB|U|2769
4V6K|1|AB|G|2770
4V6K|1|AB|C|2771

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AK

50S ribosomal protein L13

Chain AL

50S ribosomal protein L14