J4_4V6L_007

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GGAAG*CGCG*CAGG*CCGUAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|297
4V6L|1|BB|G|298
4V6L|1|BB|A|299
4V6L|1|BB|A|300
4V6L|1|BB|G|301
*
4V6L|1|BB|C|316
4V6L|1|BB|G|317
4V6L|1|BB|C|318
4V6L|1|BB|G|319
*
4V6L|1|BB|C|323
4V6L|1|BB|A|324
4V6L|1|BB|G|325
4V6L|1|BB|G|326
*
4V6L|1|BB|C|336
4V6L|1|BB|C|337
4V6L|1|BB|G|338
4V6L|1|BB|U|339
4V6L|1|BB|A|340
4V6L|1|BB|C|341

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BF

50S ribosomal protein L4

Chain BV

50S ribosomal protein L24