J4_4V6L_016

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GGGCU*GGAC*GGAAG*UGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|BB|G|2643
4V6L|1|BB|G|2644
4V6L|1|BB|G|2645
4V6L|1|BB|C|2646
4V6L|1|BB|U|2647
*
4V6L|1|BB|G|2673
4V6L|1|BB|G|2674
4V6L|1|BB|A|2675
4V6L|1|BB|C|2676
*
4V6L|1|BB|G|2731
4V6L|1|BB|G|2732
4V6L|1|BB|A|2733
4V6L|1|BB|A|2734
4V6L|1|BB|G|2735
*
4V6L|1|BB|U|2769
4V6L|1|BB|G|2770
4V6L|1|BB|C|2771

Current chains

Chain BB

50S ribosomal RNA 23S

Nearby chains

Chain BE

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain BL

50S ribosomal protein L14