J4_4V6V_006

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

AAGAAAU*AGAUU*AGCAG*CUAAAU

Length

23 nucleotides

Bulged bases

4V6V|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|A|218
4V6V|1|BA|A|219
4V6V|1|BA|G|220
4V6V|1|BA|A|221
4V6V|1|BA|A|222
4V6V|1|BA|A|223
4V6V|1|BA|U|224
*
4V6V|1|BA|A|231
4V6V|1|BA|G|232
4V6V|1|BA|A|233
4V6V|1|BA|U|234
4V6V|1|BA|U|235
*
4V6V|1|BA|A|262
4V6V|1|BA|G|263
4V6V|1|BA|C|264
4V6V|1|BA|A|265
4V6V|1|BA|G|266
*
4V6V|1|BA|C|426
4V6V|1|BA|U|427
4V6V|1|BA|A|428
4V6V|1|BA|A|429
4V6V|1|BA|A|430
4V6V|1|BA|U|431

Current chains

Chain BA

23S ribosomal RNA

Nearby chains